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Mapbox display issue (api changing without building auspice)
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3
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103
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May 12, 2025
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How do I install additional packages in the nextstrain conda environment?
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2
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110
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April 17, 2025
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Customizing Colors in Nextstrain SARS-CoV-2 Temporal Phylogenetic Tree for Enhanced Analysis
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5
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174
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March 31, 2025
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SARS-CoV-2 new lineage BA.3.2 still not in nightly.json
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2
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225
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March 29, 2025
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Tree visualization issue with num_date
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1
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66
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March 24, 2025
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Using influenza datasets in clades.nextstrain.org
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7
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259
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March 20, 2025
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Phylogeny analysis of RSV A and B
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0
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93
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February 18, 2025
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Using marginal for augur traits
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0
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64
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February 14, 2025
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Trouble with SARS_CoV_2
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38
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598
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February 10, 2025
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Where can I look up clade defining mutations for seasonal flu?
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1
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546
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February 4, 2025
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Is it possible to display the "Second Tree" dropdown menu in a Nextstrain group?
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2
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67
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January 30, 2025
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Nextclade CLI error - Alignment matrix size exceeds maximum value
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2
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119
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January 14, 2025
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Displaying a Map in Auspice
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5
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609
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January 5, 2025
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New version rule align error
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2
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87
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December 29, 2024
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I want to make a phylogenetic tree using augur and auspice pipeline that analyzes the transmission of SARS-CoV-2 from the global context into the Philippines
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0
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50
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December 28, 2024
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Timing of nightly build
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2
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83
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December 24, 2024
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Problems with coordinate binding
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2
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82
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November 23, 2024
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Nextstrain files/datasets in Google Cloud (GCP)?
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3
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102
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November 22, 2024
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Load json fails when change dataset on nextstrain
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1
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57
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November 20, 2024
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Error: Alignment must have at least 3 sequences
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9
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1162
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November 7, 2024
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RSV-A lineage reference sequences have discordant clade assignments
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3
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132
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October 27, 2024
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Nextclade set of possible lineages or distance metric
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2
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104
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October 6, 2024
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Are gaps due to true insertions ok to leave in the alignment?
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1
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115
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August 20, 2024
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View in NextClade Feature
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0
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49
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September 20, 2024
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Tree shows an X at the end of branches... what do they mean?
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2
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198
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July 22, 2024
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Difference between sequence samples based on Dataset
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1
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55
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September 16, 2024
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Mpox Sequence Changes from Root
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2
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101
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September 5, 2024
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"Could not determine delimiter" error with metadata files
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5
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409
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August 28, 2024
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Influenza vaccine selection dates
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1
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67
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August 15, 2024
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Download and rename all builds from nextstrain.org/groups
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5
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95
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August 1, 2024
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