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Question about frequency values in builds files
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3
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108
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October 15, 2024
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How to type RSV clades
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3
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172
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October 9, 2024
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Next Strain Q/A
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0
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73
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July 31, 2024
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Comparable mutation metrics?
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1
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88
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September 18, 2024
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Mpox lineage in metadata is different from what shows in the tree
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2
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118
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August 20, 2024
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Tree topology different than expected
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0
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47
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August 16, 2024
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Resource for representative nucleotide changes for Nextstrain clades
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1
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83
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August 2, 2024
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Titer measurement of seasonal influenza
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2
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397
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July 17, 2024
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NextClade Variant Calling info
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11
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944
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June 20, 2024
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Ancestral Node date calculations?
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9
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526
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May 8, 2024
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Configuration of tip box metadata display order
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1
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220
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April 26, 2024
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Extracting discrete transition states
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1
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415
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October 5, 2023
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FLU B Victoria reference segments
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2
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190
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April 10, 2024
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Question about "augur refine"
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1
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344
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April 8, 2024
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Validation of auspice/tb.json failed.
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0
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170
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April 8, 2024
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Help with making H3N2 tanglegram figure
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4
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386
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March 27, 2024
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Substitution model used for phylogenetic tree construction for seasonal influenza A H3N2 HA
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2
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245
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March 25, 2024
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Index url json for Nextclade v3 (datasets)
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1
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1239
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February 28, 2024
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Uploading a narrative to a lab group page
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1
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184
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February 16, 2024
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Providing Multiple Sequence Alignments with NexStrain Trees
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4
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495
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February 13, 2024
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Sequence missing after certain dates
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5
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323
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January 16, 2024
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Visualization of JSON tree created by Next strain Workflow
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5
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857
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December 17, 2023
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Is Auspice hover-over information display configurable?
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5
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381
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November 19, 2023
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21L(Omicron, BA.2) showing up as B.1.1.529
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1
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400
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October 5, 2023
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Request for comments: how do you subsample your data?
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0
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384
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September 12, 2023
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SARS-CoV-2 E484K mutation and del 69-70 deletion
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7
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696
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July 18, 2023
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Differences in clade classification (results folder vs JSON)
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3
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617
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May 25, 2023
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[Non-Nextstrain survey] What are the pain points in getting data ready for phylogenomic analysis?
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2
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338
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May 19, 2023
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How to interpret the entropy data
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8
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1871
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May 4, 2023
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Assigning Clades from SNPs
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1
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379
|
April 17, 2023
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