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Next Strain Q/A
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0
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71
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July 31, 2024
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Comparable mutation metrics?
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1
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86
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September 18, 2024
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Mpox lineage in metadata is different from what shows in the tree
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2
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112
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August 20, 2024
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Tree topology different than expected
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0
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46
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August 16, 2024
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Resource for representative nucleotide changes for Nextstrain clades
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1
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75
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August 2, 2024
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Titer measurement of seasonal influenza
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2
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391
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July 17, 2024
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NextClade Variant Calling info
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11
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918
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June 20, 2024
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Ancestral Node date calculations?
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9
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505
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May 8, 2024
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Configuration of tip box metadata display order
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1
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206
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April 26, 2024
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Extracting discrete transition states
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1
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410
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October 5, 2023
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FLU B Victoria reference segments
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2
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186
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April 10, 2024
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Question about "augur refine"
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1
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334
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April 8, 2024
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Validation of auspice/tb.json failed.
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0
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169
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April 8, 2024
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Help with making H3N2 tanglegram figure
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4
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367
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March 27, 2024
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Substitution model used for phylogenetic tree construction for seasonal influenza A H3N2 HA
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2
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240
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March 25, 2024
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Index url json for Nextclade v3 (datasets)
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1
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1227
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February 28, 2024
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Uploading a narrative to a lab group page
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1
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182
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February 16, 2024
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Providing Multiple Sequence Alignments with NexStrain Trees
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4
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481
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February 13, 2024
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Sequence missing after certain dates
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5
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309
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January 16, 2024
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Visualization of JSON tree created by Next strain Workflow
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5
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839
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December 17, 2023
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Is Auspice hover-over information display configurable?
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5
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373
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November 19, 2023
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21L(Omicron, BA.2) showing up as B.1.1.529
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1
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393
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October 5, 2023
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Request for comments: how do you subsample your data?
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0
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380
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September 12, 2023
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SARS-CoV-2 E484K mutation and del 69-70 deletion
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7
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667
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July 18, 2023
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Differences in clade classification (results folder vs JSON)
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3
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604
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May 25, 2023
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[Non-Nextstrain survey] What are the pain points in getting data ready for phylogenomic analysis?
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2
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332
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May 19, 2023
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How to interpret the entropy data
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8
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1855
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May 4, 2023
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Assigning Clades from SNPs
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1
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372
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April 17, 2023
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Nextclade - Dengue
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1
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468
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March 23, 2023
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nextStrain for human evolution and human strand/race/ethnicity
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2
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416
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March 6, 2023
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